The warranty is what I would be worried about, that and the company installing the roof. Is this a cheap product with a minimal warranty or a high end product with a long warranty? Is the company that did the work a well known large company with 50+ years behind them or a small crew just working in one area? If it were my house and I paid big bucks for a high quality roof with a long (and expensive) warranty I would expect everything to be to code. If the roof fails and you go for a claim they will absolutely inspect the installation and if the find anything that is not exactly to code and warranty specs they will deny the claim. Do you think the contractor will back their work in that case or will they even be around? Your call to make.